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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3953466_3956733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3953466 - 3956733

Intron Length:

3268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

TCTCAGTGAAAC

Flanking Amino Acid:

GLPVTRDEMNTTGVSVSEVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.1

32.4

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

44.1

-0.6

2.9

63.8

41.6

Minor BPS

-0.6

2.3

55.27

42.2

Associated Gene:

Gene:

GOLGA3

Ensembl Gene ID:

ENSAPLG00000003277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003366

3953115 - 3976291

23177