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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3961133_3961730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3961133 - 3961730

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TAGTCCAGATTC

Flanking Amino Acid:

QKSVLTRDSTVHDLRQQLAS

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

71.1

37.5

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

86.4

0.82

0.7

80.4

31.6

Minor 5ss

32.7

-2

3.1

40.4

45.8

Minor BPS

45.8

-0.3

1.9

57.59

Associated Gene:

Gene:

GOLGA3

Ensembl Gene ID:

ENSAPLG00000003277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003366

3953115 - 3976291

23177