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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3962970_3963879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3962970 - 3963879

Intron Length:

910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TTTTTCTGCACA

Flanking Amino Acid:

RIAAQLQNIEADMLDQEAAF

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

83.5

0.75

0.8

32.1

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

62.4

0.38

1.9

79.77

36.3

Associated Gene:

Gene:

GOLGA3

Ensembl Gene ID:

ENSAPLG00000003277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003366

3953115 - 3976291

23177