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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3965176_3966431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3965176 - 3966431

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TGTTCTTGAAAC

Flanking Amino Acid:

KVKEQFLQQKVMVEAYRRDA

Intron Amino Acid Position:

862

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

74.6

0.61

65.6

41.4

Major PPT

61.6

0.26

1.2

67.2

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

64.5

0.43

1.5

73.65

36.5

Associated Gene:

Gene:

GOLGA3

Ensembl Gene ID:

ENSAPLG00000003277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003366

3953115 - 3976291

23177