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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3974216_3975234_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3974216 - 3975234

Intron Length:

1019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGGCCT

5'SS Class:

major

3'SS Sequence:

AAAACTCTAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

GTTCCCAAAACT

Flanking Amino Acid:

KNLNSCLRQLKQEMDSLQRQ

Intron Amino Acid Position:

1445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.4

41.8

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

49.1

-0

1.1

46.5

39.5

Minor 5ss

41.2

-1

3.3

57.3

41.3

Minor BPS

56.5

0.28

79.67

41.6

Associated Gene:

Gene:

GOLGA3

Ensembl Gene ID:

ENSAPLG00000003277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003366

3953115 - 3976291

23177