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Intron Name: Anas_platyrhynchos_platyrhynchos_16_3997467_3998428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3997467 - 3998428

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

AAATTGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TCTTATTAAAAT

Flanking Amino Acid:

CNRFKTPHPSGKSKKCCNSI

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

73.2

0.52

65.4

44.5

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

51.8

0.14

1.9

73.73

43.2

Associated Gene:

Gene:

ANKLE2

Ensembl Gene ID:

ENSAPLG00000003408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003492

3987359 - 4001189

13831