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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4009258_4009686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4009258 - 4009686

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTTGTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

84.4

0.85

34.5

Major PPT

76.5

0.6

38.8

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

65.1

0.55

83.97

37.3

Associated Gene:

Gene:

PGAM5

Ensembl Gene ID:

ENSAPLG00000003722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003807

4005435 - 4013075

7641