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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4152280_4154316_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4152280 - 4154316

Intron Length:

2037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTACTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

CTTTACTGAAAC

Flanking Amino Acid:

LLAIRFLNAENAQKFKAKFE

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

0.38

1.1

62.7

42.2

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

56.8

0.19

1.8

69.94

40.8

Associated Gene:

Gene:

RANBP1

Ensembl Gene ID:

ENSAPLG00000003954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004056

4151138 - 4157888

6751