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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4160136_4160860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4160136 - 4160860

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAATTAAC

5'SS Class:

major

3'SS Sequence:

CTGATTTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTCTGATTT

Flanking Amino Acid:

ECEQVLQKLAKEIGNNNRAL

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

31.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

63.9

0.31

1.1

44.5

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

58.1

0.33

1.7

77.22

39.5

Associated Gene:

Gene:

TRMT2A

Ensembl Gene ID:

ENSAPLG00000004108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028501

4159504 - 4167293

7790

ENSAPLT00000004235

4159504 - 4167293

7790