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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4160970_4161460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4160970 - 4161460

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

ATTTTAAATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTAAAT

Flanking Amino Acid:

VEGVKASPLQTEYRNKCEFL

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.5

0.44

61.4

43.4

Minor 5ss

37.1

-1.5

3.2

48.4

47.2

Minor BPS

70.8

0.73

1.3

85.51

34.3

Associated Gene:

Gene:

TRMT2A

Ensembl Gene ID:

ENSAPLG00000004108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028501

4159504 - 4167293

7790

ENSAPLT00000004235

4159504 - 4167293

7790