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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4163044_4163609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4163044 - 4163609

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TCCCCTTCTACC

Flanking Amino Acid:

TSLYFVEEGQRKSPNLEDLP

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

72.2

0.5

0.9

65.3

34.9

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

46.9

-0.2

1.8

56.05

42.6

Associated Gene:

Gene:

TRMT2A

Ensembl Gene ID:

ENSAPLG00000004108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028501

4159504 - 4167293

7790

ENSAPLT00000004235

4159504 - 4167293

7790