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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4163722_4165518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4163722 - 4165518

Intron Length:

1797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

CTTGATTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

TTTCCCTTGATT

Flanking Amino Acid:

FRISPHAFFQKVKKVIGIEL

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

67.1

Major BPS

71.5

0.53

1.1

43.2

Major PPT

75.5

0.57

0.9

69.9

36.3

Minor 5ss

36.1

-1.6

3.5

47.8

42.2

Minor BPS

81.9

1.08

92.92

28.4

Associated Gene:

Gene:

TRMT2A

Ensembl Gene ID:

ENSAPLG00000004108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028501

4159504 - 4167293

7790