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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4165595_4166138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4165595 - 4166138

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTAGTTAA

5'SS Class:

major

3'SS Sequence:

CTTTGTTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTTTGTTTAATA

Flanking Amino Acid:

QDAKANAQINELNNIEFHCG

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

72.7

34.6

Major BPS

0.72

38.9

Major PPT

76.5

0.6

0.9

73.3

35.9

Minor 5ss

36.4

-1.5

2.7

42.9

Minor BPS

65.2

0.47

1.8

74.34

38.4

Associated Gene:

Gene:

TRMT2A

Ensembl Gene ID:

ENSAPLG00000004108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028501

4159504 - 4167293

7790

ENSAPLT00000004235

4159504 - 4167293

7790