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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4166578_4166894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4166578 - 4166894

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTTCCCATCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTCCCATCAAG

Flanking Amino Acid:

NPRAAMNNFIDLCRAPSNRV

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

76.8

33.7

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

70.8

0.47

1.1

69.3

36.3

Minor 5ss

33.2

-1.9

2.8

38.8

40.3

Minor BPS

47.6

-0.3

2.2

63.5

43.7

Associated Gene:

Gene:

TRMT2A

Ensembl Gene ID:

ENSAPLG00000004108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028501

4159504 - 4167293

7790

ENSAPLT00000004235

4159504 - 4167293

7790