Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_4216348_4223572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4216348 - 4223572

Intron Length:

7225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTAATCTAACT

Flanking Amino Acid:

MHTGLDMEEGKEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.7

0.58

0.9

70.4

39.9

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

52.5

0.16

1.9

75.65

40.4

Associated Gene:

Gene:

TANGO2

Ensembl Gene ID:

ENSAPLG00000003711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003824

4207236 - 4230142

22907