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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4488570_4492727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4488570 - 4492727

Intron Length:

4158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TCATGCCTGACT

Flanking Amino Acid:

DMIPMDELGPDGYSTIDHRD

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

75.9

0.64

66.1

40.5

Major PPT

83.4

0.75

0.7

81.6

29.9

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

49.9

0.08

2.1

72.69

44.2

Associated Gene:

Gene:

ARVCF

Ensembl Gene ID:

ENSAPLG00000002841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002946

4338946 - 4495493

156548