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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4535211_4535523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4535211 - 4535523

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGAAT

5'SS Class:

major

3'SS Sequence:

TGGTTTGTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTATGTTCAATT

Flanking Amino Acid:

WNIAHPVHHNWSEMAQAVQN

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

73.7

36.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

64.4

0.33

1.1

61.1

44.7

Minor 5ss

33.4

-1.9

3.3

44.8

44.5

Minor BPS

55.5

0.25

1.9

76.74

40.4

Associated Gene:

Gene:

TXNRD2

Ensembl Gene ID:

ENSAPLG00000002411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017269

4532425 - 4566194

33770

ENSAPLT00000002443

4532425 - 4573376

40952