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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4542565_4542941_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4542565 - 4542941

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GATACTTCACCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATTTCTTTAATT

Flanking Amino Acid:

PGKTLVVGASYISLECAGFL

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.8

-0

1.3

55.7

43.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

64.6

0.33

55.9

44.1

Minor 5ss

100

1.68

0.4

100

Minor BPS

86.2

1.21

0.8

94.15

26.1

Associated Gene:

Gene:

TXNRD2

Ensembl Gene ID:

ENSAPLG00000002411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017269

4532425 - 4566194

33770

ENSAPLT00000002443

4532425 - 4573376

40952