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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4545727_4552367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4545727 - 4552367

Intron Length:

6641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCGTCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTACTTTAATT

Flanking Amino Acid:

DSFDTVMWAVGRAPDTKALN

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

72.9

0.51

76.2

32.8

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

81.9

1.08

92.54

29.6

Associated Gene:

Gene:

TXNRD2

Ensembl Gene ID:

ENSAPLG00000002411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017269

4532425 - 4566194

33770

ENSAPLT00000002443

4532425 - 4573376

40952