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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4557905_4558112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4557905 - 4558112

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGATGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCATAT

U12 Branch Point Sequence:

TTCACAGTAACA

Flanking Amino Acid:

QSSELMDYDNVPTTVFTPLE

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.6

29.1

Major BPS

74.2

0.6

69.3

38.4

Major PPT

62.7

0.29

1.1

57.8

41.2

Minor 5ss

39.8

-1.1

55.2

42.1

Minor BPS

49.4

-0

2.3

69.25

42.8

Associated Gene:

Gene:

TXNRD2

Ensembl Gene ID:

ENSAPLG00000002411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017269

4532425 - 4566194

33770

ENSAPLT00000002443

4532425 - 4573376

40952