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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4558206_4559036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4558206 - 4559036

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCCTTACCA

Flanking Amino Acid:

VQCYGSDNIEVYHAFYKPLE

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.1

0.77

0.8

78.4

34.8

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

82.6

1.02

1.5

91.36

30.2

Associated Gene:

Gene:

TXNRD2

Ensembl Gene ID:

ENSAPLG00000002411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017269

4532425 - 4566194

33770

ENSAPLT00000002443

4532425 - 4573376

40952