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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4559109_4560946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4559109 - 4560946

Intron Length:

1838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTATTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTCTATGTAATG

Flanking Amino Acid:

ERDATQCYMKMVCLREREQR

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

84.1

26.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

80.3

0.68

0.9

77.1

41.8

Minor 5ss

34.9

-1.7

3.4

49.4

41.3

Minor BPS

-0.2

2.2

59.41

43.3

Associated Gene:

Gene:

TXNRD2

Ensembl Gene ID:

ENSAPLG00000002411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017269

4532425 - 4566194

33770

ENSAPLT00000002443

4532425 - 4573376

40952