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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4644245_4644815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4644245 - 4644815

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

CTCTCCTCTCCT

Flanking Amino Acid:

SPAHQNGTEKDAADARRDYE

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.9

35.3

Major BPS

0.28

1.1

63.1

35.8

Major PPT

68.6

0.42

0.8

61.9

28.8

Minor 5ss

35.2

-1.7

2.8

43.7

Minor BPS

39.3

-0.7

3.6

68.05

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021102

4642897 - 4651739

8843

ENSAPLT00000042653

4642897 - 4655704

12808