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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4645180_4646299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4645180 - 4646299

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGCGG

5'SS Class:

major

3'SS Sequence:

CTTCTCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TTCTCCTTACAG

Flanking Amino Acid:

TAVTAYQNHRITQLKIASNP

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

51.3

46.9

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

86.1

0.81

0.7

25.5

Minor 5ss

24.3

-3

21.2

37.4

Minor BPS

62.1

0.24

1.8

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042653

4642897 - 4655704

12808

ENSAPLT00000021102

4642897 - 4651739

8843