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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4646823_4647937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4646823 - 4647937

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CCGTGGCTGACG

Flanking Amino Acid:

DFVPVDDKRYRYAFHSSSWL

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

1.2

85.2

29.9

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

68.6

0.42

64.2

36.7

Minor 5ss

27.2

-2.6

3.7

39.1

38.9

Minor BPS

-1.2

2.5

38.28

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021102

4642897 - 4651739

8843

ENSAPLT00000042653

4642897 - 4655704

12808