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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4648040_4650729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4648040 - 4650729

Intron Length:

2690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCG

5'SS Class:

major

3'SS Sequence:

TGCTCTGCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

CTCAGCTCAGCT

Flanking Amino Acid:

GTEMIVTKAGRRMFPTFQVK

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.3

69.7

41.3

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

65.5

0.35

1.1

61.4

40.1

Minor 5ss

28.4

-2.5

2.9

33.2

41.8

Minor BPS

43.4

-0.4

2.2

60.64

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042653

4642897 - 4655704

12808

ENSAPLT00000021102

4642897 - 4651739

8843