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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4651190_4652230_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4651190 - 4652230

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

GGAATGATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

TTTTTTGGAATG

Flanking Amino Acid:

HFSTVTRDMEAISSPWLTQL

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

61.5

0.26

1.1

55.3

48.4

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

48.5

-0.2

2.1

63.05

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042653

4642897 - 4655704

12808