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Intron Name: Anas_platyrhynchos_platyrhynchos_16_47046_47432_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
47046 - 47432

Intron Length:
387

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAACAGC

5'SS Class:
major

3'SS Sequence:
TATTTTCTTAAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTCAAT

U12 Branch Point Sequence:
ATTTTCTTAAAG

Flanking Amino Acid:
LDEKWKNAYKTALLDDPVFI

Intron Amino Acid Position:
946

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
69.5
41.5

Major BPS
64.5
0.36
1.3
74.4
37.1

Major PPT
78.3
0.64
1
79.1
32.9

Minor 5ss
39.1
-1.2
3
52.1
44.7

Minor BPS
73.4
0.6
1.4
74.89
36.7

Associated Gene:

Gene:
DHX37

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43730 - 60314
16585