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Intron Name: Anas_platyrhynchos_platyrhynchos_16_47846_48093_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
47846 - 48093

Intron Length:
248

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACTGCAG

5'SS Class:
major

3'SS Sequence:
TGTTCACTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAC

U12 Branch Point Sequence:
TTTTCTCCACCT

Flanking Amino Acid:
QKLGDLMVMLGAVGACEYAG

Intron Amino Acid Position:
849

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.3
0.41
1.1
53.5
45

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
80.1
0.68
0.9
70.6
40.2

Minor 5ss
29.1
-2.4
3.4
38.3
46.7

Minor BPS
50.8
0.1
2.1
80.84
41

Associated Gene:

Gene:
DHX37

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43730 - 60314
16585