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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4811138_4812833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4811138 - 4812833

Intron Length:

1696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCC

5'SS Class:

major

3'SS Sequence:

TCTGTCTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

ACTGACTGCATT

Flanking Amino Acid:

YRAQCIQQMTSKLTQDNRIE

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

65.8

40.2

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

77.9

0.63

0.8

36.5

Minor 5ss

28.6

-2.4

35.8

Minor BPS

-0.4

2.1

59.76

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031853

4809377 - 4822673

13297

ENSAPLT00000016943

4810297 - 4849446

39150

ENSAPLT00000011550

4809377 - 4849001

39625