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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4814281_4815172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4814281 - 4815172

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGCGAT

U12 Branch Point Sequence:

GGCTCAGCGATG

Flanking Amino Acid:

EFKQQDRELKESAPFAVIGS

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.5

Major BPS

45.4

-0.2

1.3

39.5

40.8

Major PPT

80.2

0.68

0.9

71.9

Minor 5ss

-1.8

3.3

48.8

Minor BPS

36.1

-1.2

2.2

37.19

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031853

4809377 - 4822673

13297

ENSAPLT00000016943

4810297 - 4849446

39150

ENSAPLT00000011550

4809377 - 4849001

39625