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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4817461_4848810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4817461 - 4848810

Intron Length:

31350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

ACTCTGTCAATT

Flanking Amino Acid:

EQAAQPRGEAGESGLGKSTL

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.3

39.5

Major BPS

63.3

0.33

1.2

39.8

Major PPT

63.7

0.31

63.4

37.3

Minor 5ss

30.6

-2.2

3.4

39.1

46.7

Minor BPS

45.5

-0.2

2.1

63.32

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016224

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016943

4810297 - 4849446

39150