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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4852199_4859853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

4852199 - 4859853

Intron Length:

7655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTTCCACT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.3

0.77

0.8

79.2

32.9

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

51.1

0.12

75.09

42.3

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038040

4851398 - 4882450

31053

ENSAPLT00000017926

4851398 - 4882450

31053

ENSAPLT00000016772

4851398 - 4883431

32034