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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4859948_4866300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4859948 - 4866300

Intron Length:

6353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTGTCCTAAACA

Flanking Amino Acid:

DRILQQKEAELRRMQEMIAQ

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

72.7

0.57

72.1

31.1

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

75.3

0.79

1.6

83.14

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038040

4851398 - 4882450

31053

ENSAPLT00000017926

4851398 - 4882450

31053

ENSAPLT00000016772

4851398 - 4883431

32034