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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4867449_4868453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4867449 - 4868453

Intron Length:

1005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTGCTCGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TGTTCAATAGCC

Flanking Amino Acid:

NDFLKLRTMLVTHMQDLQEV

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

76.1

34.8

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

73.8

0.54

0.9

65.9

40.9

Minor 5ss

33.9

-1.8

2.9

43.1

43.9

Minor BPS

49.5

-0

2.1

70.03

40.5

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017926

4851398 - 4882450

31053

ENSAPLT00000016772

4851398 - 4883431

32034

ENSAPLT00000038040

4851398 - 4882450

31053