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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4868600_4869417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4868600 - 4869417

Intron Length:

818

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TTTGTCTCAACT

Flanking Amino Acid:

EFKEQTRVLKASIPFAVIGS

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.8

1.18

0.7

98.3

5.31

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

65.9

0.36

60.6

40.6

Minor 5ss

-2.3

3.8

44.9

43.2

Minor BPS

70.2

0.71

1.6

87.74

37.8

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038040

4851398 - 4882450

31053

ENSAPLT00000017926

4851398 - 4882450

31053

ENSAPLT00000016772

4851398 - 4883431

32034