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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4880632_4882122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4880632 - 4882122

Intron Length:

1491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

ATAACCTGAATT

Flanking Amino Acid:

KGFEFTLMVVGESGLGKSTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

74.1

36.5

Major BPS

70.1

0.5

70.3

31.9

Major PPT

86.4

0.82

0.8

80.4

36.6

Minor 5ss

34.7

-1.7

2.9

41.5

39.2

Minor BPS

65.1

0.55

1.4

77.57

38.3

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038040

4851398 - 4882450

31053

ENSAPLT00000016772

4851398 - 4883431

32034