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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4924798_4925176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4924798 - 4925176

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TGCATTATAACT

Flanking Amino Acid:

GPFLYCSLMEGTPDVRLFSK

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

84.6

33.3

Major BPS

77.9

0.69

78.3

31.3

Major PPT

88.2

0.86

0.6

88.1

21.7

Minor 5ss

34.8

-1.7

3.1

49.5

46.3

Minor BPS

52.7

0.16

1.6

69.79

41.1

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032033

4919660 - 4934298

14639

ENSAPLT00000016341

4883382 - 4932419

49038