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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4926017_4926424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4926017 - 4926424

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

GCTTACCTAACA

Flanking Amino Acid:

KRLQEFLADMGLPLKQVKQK

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

83.9

30.3

Major BPS

57.4

0.18

1.3

65.4

Major PPT

82.2

0.72

0.8

80.5

31.5

Minor 5ss

40.2

-1.1

49.9

46.4

Minor BPS

57.7

0.24

1.9

70.22

41.4

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032033

4919660 - 4934298

14639

ENSAPLT00000016341

4883382 - 4932419

49038