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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4926557_4926946_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4926557 - 4926946

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

AATTCCTGTTAAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTCCTATAATT

Flanking Amino Acid:

IDCMRIAFEYDLRLALYQHW

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.4

-0

1.2

44.2

Major BPS

73.5

0.59

81.3

29.9

Major PPT

61.9

0.27

1.2

40.6

Minor 5ss

86.2

1.22

1.2

77.6

38.7

Minor BPS

68.3

0.65

1.5

86.41

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016341

4883382 - 4932419

49038

ENSAPLT00000032033

4919660 - 4934298

14639