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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4928365_4929160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4928365 - 4929160

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TCTTTTTGTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATCTATC

Flanking Amino Acid:

YEQYEYHGTSSAMVMFDLAW

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

81.2

32.7

Major BPS

84.8

0.86

85.7

34.9

Major PPT

82.9

0.74

0.8

80.6

31.5

Minor 5ss

41.5

-0.9

2.8

41.2

Minor BPS

47.7

-0.1

2.1

65.17

40.1

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032033

4919660 - 4934298

14639

ENSAPLT00000016341

4883382 - 4932419

49038