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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4931827_4932260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4931827 - 4932260

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TTTTTGTTACTT

Flanking Amino Acid:

ETAFLEHKDQFKYFVLINCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

71.4

0.53

1.2

63.4

Major PPT

85.4

0.8

79.9

32.1

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

56.2

0.27

2.3

82.74

39.5

Associated Gene:

Gene:

CDC45

Ensembl Gene ID:

ENSAPLG00000016068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032033

4919660 - 4934298

14639

ENSAPLT00000016341

4883382 - 4932419

49038