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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4934928_4935595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4934928 - 4935595

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTGCC

5'SS Class:

major

3'SS Sequence:

TTCATTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTCCTAATT

Flanking Amino Acid:

DRSDVEKGGKIIMPPSALDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

40.7

Major BPS

100

1.24

0.5

100

Major PPT

85.5

0.8

80.7

31.2

Minor 5ss

41.3

-1

49.6

40.9

Minor BPS

0.71

1.6

86.76

32.5

Associated Gene:

Gene:

UFD1

Ensembl Gene ID:

ENSAPLG00000003494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023502

4934699 - 4941099

6401

ENSAPLT00000003594

4934699 - 4941099

6401