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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4936555_4936951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4936555 - 4936951

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTC

Flanking Amino Acid:

DEGICYLPHWMMQNLLLEEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.8

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.9

0.9

0.7

85.1

29.6

Minor 5ss

-1.6

2.9

40.9

45.4

Minor BPS

60.6

0.31

1.5

68.94

37.7

Associated Gene:

Gene:

UFD1

Ensembl Gene ID:

ENSAPLG00000003494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023502

4934699 - 4941099

6401

ENSAPLT00000003594

4934699 - 4941099

6401