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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4938922_4939204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4938922 - 4939204

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTCCCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TTTTCCCTCACA

Flanking Amino Acid:

ERSAQHEDTADVEADHSGYV

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.3

32.1

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

85.8

0.8

0.7

80.5

24.9

Minor 5ss

41.7

-0.9

2.8

54.7

43.6

Minor BPS

0.5

2.1

84.22

35.9

Associated Gene:

Gene:

UFD1

Ensembl Gene ID:

ENSAPLG00000003494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023502

4934699 - 4941099

6401

ENSAPLT00000003594

4934699 - 4941099

6401