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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4940546_4940958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4940546 - 4940958

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TCTCCTTTATCC

Flanking Amino Acid:

SRPLVKKVEEDESGSRFIAF

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

79.6

0.67

0.8

72.6

36.7

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

63.3

0.4

1.6

71.42

40.1

Associated Gene:

Gene:

UFD1

Ensembl Gene ID:

ENSAPLG00000003494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003594

4934699 - 4941099

6401