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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4943943_4944308_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4943943 - 4944308

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTAAC

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

ATACTATGAATA

Flanking Amino Acid:

ETPLKFSDNSRVRSLPPLSF

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

1.1

81.4

32.7

Major BPS

64.7

0.37

31.5

Major PPT

71.6

0.49

0.9

66.5

33.7

Minor 5ss

41.6

-0.9

2.6

43.3

Minor BPS

47.8

-0.1

1.6

58.35

34.2

Associated Gene:

Gene:

MRPL40

Ensembl Gene ID:

ENSAPLG00000004002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004092

4943417 - 4946895

3479