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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4970291_4970801_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4970291 - 4970801

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAATAA

5'SS Class:

major

3'SS Sequence:

ATTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTTCTCATTT

Flanking Amino Acid:

RLVPVTLTVQSPATLGPEKD

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

72.4

27.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.1

0.95

0.7

85.1

34.9

Minor 5ss

31.2

-2.2

3.1

37.8

Minor BPS

51.6

0.13

1.8

69.81

41.8

Associated Gene:

Gene:

HIRA

Ensembl Gene ID:

ENSAPLG00000004150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004347

4953868 - 4979032

25165