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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4973278_4974017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4973278 - 4974017

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

ALTTAATLSVWDVHKQTVIV

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

89.4

0.89

0.7

88.9

28.2

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

HIRA

Ensembl Gene ID:

ENSAPLG00000004150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004347

4953868 - 4979032

25165