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Intron Name: Anas_platyrhynchos_platyrhynchos_16_4974077_4975029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4974077 - 4975029

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

AATTGATTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTGGTCTGAATT

Flanking Amino Acid:

RDESLQTILSGSDATLSQIL

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

70.5

0.46

63.5

42.2

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

0.42

1.5

75.93

41.4

Associated Gene:

Gene:

HIRA

Ensembl Gene ID:

ENSAPLG00000004150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004347

4953868 - 4979032

25165